BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C06SP1|AL425664
(779 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1517 1488 0.0
>3x_Contig1517
Length = 8289
Score = 1488 bits (748), Expect = 0.0
Identities = 771/780 (98%), Gaps = 1/780 (0%)
Strand = Plus / Plus
Query: 1 atctgttttcctgga-tcaytaaactctgcgattgtgactgatgatgattacgttattgg 59
||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 1157 atctgttttcctggactcaccaaactctgcgattgttactgatgatgattacgttattgg 1216
Query: 60 aagctcagagttctctaacgacgcagataataagggccaaaacaacaacagtggttctgg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 aagctcagagttctctaacgacgcagataataagggccaaaacaacaacagtggttctgg 1276
Query: 120 agtttcaaggacgccatccactttgaaaagagtcactggtttcctttcgagaaagagttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 agtttcaaggacgccatccactttgaaaagagtcactggtttcctttcgagaaagagttc 1336
Query: 180 tgtctcggcagcaccggataataacaatactagcaatatactacctgarattagcagtgc 239
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 1337 tgtctcggcagcaccggataataacaatactagcaatatactacctgaaattagcagttc 1396
Query: 240 acccatggcttcatcatcttcagaacatagaaaccgcgcaagatttaacagtgtctcttc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 acccatggcttcatcatcttcagaacatagaaaccgcgcaagatttaacagtgtctcttc 1456
Query: 300 tatgacgactgaccgcaacgcttcgatattatctagtaatgctagtatcgactcttacag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1457 tatgacgactgaccgcaacgcttcgatattatctagtaatgctagtatcgactcttacag 1516
Query: 360 tacagatcaagttactaatacaagtgctaccgaagtggaaactgaaacagattatgacgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1517 tacagatcaagttactaatacaagtgctaccgaagtggaaactgaaacagattatgacgg 1576
Query: 420 tatttcaatgaatgtcaacaagaagacaaagaaaagaagattaaagaaattgaaaagtgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1577 tatttcaatgaatgtcaacaagaagacaaagaaaagaagattaaagaaattgaaaagtgt 1636
Query: 480 ggtgaaatacccatggtggagaatatctgatactaaagttaaagaatataaaacttcaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1637 ggtgaaatacccatggtggagaatatctgatactaaagttaaagaatataaaacttcaga 1696
Query: 540 tattttatcagaaactaaattcgtttatatgtggtactatgagagggtaccagtagtcta 599
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1697 tattttatcagaaactaaattcgtttatatgttgtactatgagagggtaccagtagtcta 1756
Query: 600 acctggtcagtaagcvaatactggaaccaacataacaacaaccaaaagaataagavaaaa 659
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1757 acctggtcagtaagcaaatactggaaccaacataacaacaaccaaaagaataagaaaaaa 1816
Query: 660 tagaaacatagacatattttactaaattgcacaagcggcacctcaccgctccgaatcatt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1817 tagaaacatagacatattttactaaattgcacaagcggcacctcaccgctccgaatcatt 1876
Query: 720 catcctttgtcaattaactcatcgatttatgatgaccacaggccatgtattactcgatta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1877 catcctttgtcaattaactcatcgatttatgatgaccacaggccatgtattactcgatta 1936
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6514
Number of Sequences: 1807
Number of extensions: 6514
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 779
length of database: 10,358,551
effective HSP length: 16
effective length of query: 763
effective length of database: 10,329,639
effective search space: 7881514557
effective search space used: 7881514557
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)